void |
ColumnAnnotationComponent.activityBackgroundChanged(DisplayProperties dp) |
void |
ConsensusComponent.activityBackgroundChanged(DisplayProperties dp) |
void |
DisplayPropertiesListener.activityBackgroundChanged(DisplayProperties dp) |
void |
RulerAnnotationComponent.activityBackgroundChanged(DisplayProperties dp) |
void |
RulerComponent.activityBackgroundChanged(DisplayProperties dp) |
void |
SequenceAnnComponent.activityBackgroundChanged(DisplayProperties dp) |
void |
SequenceComponent.activityBackgroundChanged(DisplayProperties dp) |
void |
SequenceNameComponent.activityBackgroundChanged(DisplayProperties dp) |
void |
Alignment.deselectAllColumns(DisplayProperties p) |
void |
Alignment.deselectAllColumns(DisplayProperties p,
boolean quickDeselect) |
void |
ColumnAnnotationComponent.displayAnnViewChanged(DisplayProperties dp,
Sequence sequence,
boolean show) |
void |
ConsensusComponent.displayAnnViewChanged(DisplayProperties dp,
Sequence sequence,
boolean show) |
void |
DisplayPropertiesListener.displayAnnViewChanged(DisplayProperties dp,
Sequence sequence,
boolean show) |
void |
RulerAnnotationComponent.displayAnnViewChanged(DisplayProperties dp,
Sequence sequence,
boolean show) |
void |
RulerComponent.displayAnnViewChanged(DisplayProperties dp,
Sequence sequence,
boolean show) |
void |
SequenceAnnComponent.displayAnnViewChanged(DisplayProperties dp,
Sequence sequence,
boolean show) |
void |
SequenceComponent.displayAnnViewChanged(DisplayProperties dp,
Sequence sequence,
boolean show) |
void |
SequenceNameComponent.displayAnnViewChanged(DisplayProperties dp,
Sequence sequence,
boolean show) |
void |
ColumnAnnotationComponent.displayColorSchemeChanged(DisplayProperties dp,
ColorScheme old) |
void |
ConsensusComponent.displayColorSchemeChanged(DisplayProperties dp,
ColorScheme old) |
void |
DisplayPropertiesListener.displayColorSchemeChanged(DisplayProperties dp,
ColorScheme old) |
void |
RulerAnnotationComponent.displayColorSchemeChanged(DisplayProperties dp,
ColorScheme old) |
void |
RulerComponent.displayColorSchemeChanged(DisplayProperties dp,
ColorScheme old) |
void |
SequenceAnnComponent.displayColorSchemeChanged(DisplayProperties dp,
ColorScheme old) |
void |
SequenceComponent.displayColorSchemeChanged(DisplayProperties dp,
ColorScheme old) |
void |
SequenceNameComponent.displayColorSchemeChanged(DisplayProperties dp,
ColorScheme old) |
void |
ColumnAnnotationComponent.displayFontChanged(DisplayProperties dp) |
void |
ConsensusComponent.displayFontChanged(DisplayProperties dp) |
void |
DisplayPropertiesListener.displayFontChanged(DisplayProperties dp) |
void |
RulerAnnotationComponent.displayFontChanged(DisplayProperties dp) |
void |
RulerComponent.displayFontChanged(DisplayProperties dp) |
void |
SequenceAnnComponent.displayFontChanged(DisplayProperties dp) |
void |
SequenceComponent.displayFontChanged(DisplayProperties dp) |
void |
SequenceNameComponent.displayFontChanged(DisplayProperties dp) |
void |
ColumnAnnotationComponent.displayGroupEditingChanged(DisplayProperties dp) |
void |
ConsensusComponent.displayGroupEditingChanged(DisplayProperties dp) |
void |
DisplayPropertiesListener.displayGroupEditingChanged(DisplayProperties dp) |
void |
RulerAnnotationComponent.displayGroupEditingChanged(DisplayProperties dp) |
void |
RulerComponent.displayGroupEditingChanged(DisplayProperties dp) |
void |
SequenceAnnComponent.displayGroupEditingChanged(DisplayProperties dp) |
void |
SequenceComponent.displayGroupEditingChanged(DisplayProperties dp) |
void |
SequenceNameComponent.displayGroupEditingChanged(DisplayProperties dp) |
void |
ColumnAnnotationComponent.displayHighlightsChanged(DisplayProperties dp,
Sequence sequence) |
void |
ConsensusComponent.displayHighlightsChanged(DisplayProperties dp,
Sequence sequence) |
void |
DisplayPropertiesListener.displayHighlightsChanged(DisplayProperties dp,
Sequence sequence) |
void |
RulerAnnotationComponent.displayHighlightsChanged(DisplayProperties dp,
Sequence sequence) |
void |
RulerComponent.displayHighlightsChanged(DisplayProperties dp,
Sequence sequence) |
void |
SequenceAnnComponent.displayHighlightsChanged(DisplayProperties dp,
Sequence sequence) |
void |
SequenceComponent.displayHighlightsChanged(DisplayProperties dp,
Sequence sequence) |
void |
SequenceNameComponent.displayHighlightsChanged(DisplayProperties dp,
Sequence sequence) |
void |
ColumnAnnotationComponent.displayHighlightsChanged(DisplayProperties dp,
Sequence[] sequenceArray) |
void |
ConsensusComponent.displayHighlightsChanged(DisplayProperties dp,
Sequence[] sequenceArray) |
void |
DisplayPropertiesListener.displayHighlightsChanged(DisplayProperties dp,
Sequence[] sequenceArray) |
void |
RulerAnnotationComponent.displayHighlightsChanged(DisplayProperties dp,
Sequence[] sequenceArray) |
void |
RulerComponent.displayHighlightsChanged(DisplayProperties dp,
Sequence[] sequenceArray) |
void |
SequenceAnnComponent.displayHighlightsChanged(DisplayProperties dp,
Sequence[] sequenceArray) |
void |
SequenceComponent.displayHighlightsChanged(DisplayProperties dp,
Sequence[] sequenceArray) |
void |
SequenceNameComponent.displayHighlightsChanged(DisplayProperties dp,
Sequence[] sequenceArray) |
void |
ColumnAnnotationComponent.displayOverwriteChanged(DisplayProperties dp) |
void |
ConsensusComponent.displayOverwriteChanged(DisplayProperties dp) |
void |
DisplayPropertiesListener.displayOverwriteChanged(DisplayProperties dp) |
void |
RulerAnnotationComponent.displayOverwriteChanged(DisplayProperties dp) |
void |
RulerComponent.displayOverwriteChanged(DisplayProperties dp) |
void |
SequenceAnnComponent.displayOverwriteChanged(DisplayProperties dp) |
void |
SequenceComponent.displayOverwriteChanged(DisplayProperties dp) |
void |
SequenceNameComponent.displayOverwriteChanged(DisplayProperties dp) |
void |
ColumnAnnotationComponent.displayRenderGapsChanged(DisplayProperties dp) |
void |
ConsensusComponent.displayRenderGapsChanged(DisplayProperties dp) |
void |
DisplayPropertiesListener.displayRenderGapsChanged(DisplayProperties dp) |
void |
RulerAnnotationComponent.displayRenderGapsChanged(DisplayProperties dp) |
void |
RulerComponent.displayRenderGapsChanged(DisplayProperties dp) |
void |
SequenceAnnComponent.displayRenderGapsChanged(DisplayProperties dp) |
void |
SequenceComponent.displayRenderGapsChanged(DisplayProperties dp) |
void |
SequenceNameComponent.displayRenderGapsChanged(DisplayProperties dp) |
void |
ColumnAnnotationComponent.displaySeqSelectChanged(DisplayProperties dp,
Sequence sequence,
boolean select) |
void |
ConsensusComponent.displaySeqSelectChanged(DisplayProperties dp,
Sequence sequence,
boolean select) |
void |
DisplayPropertiesListener.displaySeqSelectChanged(DisplayProperties dp,
Sequence sequence,
boolean select) |
void |
RulerAnnotationComponent.displaySeqSelectChanged(DisplayProperties dp,
Sequence sequence,
boolean select) |
void |
RulerComponent.displaySeqSelectChanged(DisplayProperties dp,
Sequence sequence,
boolean select) |
void |
SequenceAnnComponent.displaySeqSelectChanged(DisplayProperties dp,
Sequence sequence,
boolean select) |
void |
SequenceComponent.displaySeqSelectChanged(DisplayProperties dp,
Sequence sequence,
boolean select) |
void |
SequenceNameComponent.displaySeqSelectChanged(DisplayProperties dp,
Sequence sequence,
boolean select) |
void |
Alignment.setColumnSelected(int idx,
boolean b,
DisplayProperties p) |
static ColumnFilter |
ColumnFilterDialog.showDialog(AlignmentFrame owner,
DisplayProperties props,
int column,
ColumnFilter prevVal,
java.awt.Point location) |
static ColumnSort |
ColumnSortDialog.showDialog(AlignmentFrame owner,
DisplayProperties props,
int column,
ColumnSort prevVal,
java.awt.Point location) |