public class Alignment
extends java.lang.Object
Constructor and Description |
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Alignment(Alignment a)
Once we finished collecting, we should turn the alignment into an array backed list
|
Alignment(int frequency) |
Modifier and Type | Method and Description |
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void |
addPiece(AlignmentPiece alignPiece) |
boolean |
equals(java.lang.Object o) |
java.util.List<AlignmentPiece> |
getAlignment() |
int |
getFrequency() |
int |
hashCode() |
void |
incFrequency(int frequency) |
int |
size() |
java.lang.String |
toString() |
public Alignment(Alignment a)
a
- public Alignment(int frequency)
public void addPiece(AlignmentPiece alignPiece)
public java.util.List<AlignmentPiece> getAlignment()
public int size()
public boolean equals(java.lang.Object o)
equals
in class java.lang.Object
public java.lang.String toString()
toString
in class java.lang.Object
public int hashCode()
hashCode
in class java.lang.Object
public int getFrequency()
public void incFrequency(int frequency)